Dr. Frode S. Berven (Ph.D.) er leder av Proteomics Unit ved Universitetet i Bergen og viseleder av Institutt for biomedisin.

Berven fullførte sin mastergrad ved Institutt for molekylærbiologi, UiB. Han har en Ph.D. i bioinformatikk fra Institutt for informatikk, UiB, og har vært postdoktorforsker ved Institutt for medisin, UiB, og på Proteomics Platform på Broad Institute of MIT og Harvard.

Han arbeider innen massespektrometribaserte kvantitative proteomikker med vekt på biomarkørfunn og verifikasjon i cerebrospinalvæske hos pasienter med multippel sklerose.

BMED325

BMED320

MEDOD1

MEDOD2

2024

• Lereim, Ragnhild Reehorst; Nytrova, Petra; Guldbrandsen, Astrid et al. (2024). Natalizumab promotes anti-inflammatory and repair effects in multiple sclerosis. (ekstern lenke)
• Tijms, Betty M.; Vromen, Ellen M.; Mjaavatten, Olav et al. (2024). Cerebrospinal fluid proteomics in patients with Alzheimer’s disease reveals five molecular subtypes with distinct genetic risk profiles. (ekstern lenke)
• Eidem, Live Egeland; Birkeland, Even; Austdal, Marie et al. (2024). Fatigue in Parkinson's Disease: A Proteomic Study of Cerebrospinal Fluid. (ekstern lenke)

2023

• Barakat, Ahmed Samy Mohamed Ali; Birkeland, Even; Jørstad, Melissa Davidsen et al. (2023). Proteomic analysis of peripheral blood mononuclear cells isolated from patients with pulmonary tuberculosis: A pilot study from Zanzibar, Tanzania. (ekstern lenke)
• Bartaula-Brevik, Sushma; Leitch, Calum; Valladares, Maria del Carmen Hernandez et al. (2023). Vacuolar ATPase Is a Possible Therapeutic Target in Acute Myeloid Leukemia: Focus on Patient Heterogeneity and Treatment Toxicity. (ekstern lenke)

2022

• Neset, Lasse; Takayidza, Gracious; Berven, Frode Steingrimsen et al. (2022). Comparing Efficiency of Lysis Buffer Solutions and Sample Preparation Methods for Liquid Chromatography–Mass Spectrometry Analysis of Human Cells and Plasma. (ekstern lenke)
• Yilmaz, Ozlem; Mangor-Jensen, Anders; Harboe, Torstein et al. (2022). Quantitative proteome profiling reveals molecular hallmarks of egg quality in Atlantic halibut: impairments of transcription and protein folding impede protein and energy homeostasis during early development. (ekstern lenke)
• Teodora, Paunas Flavia; Finne, Kenneth; Leh, Sabine et al. (2022). Proteomic signature of tubulointerstitial tissue predicts prognosis in IgAN. (ekstern lenke)
• Cappelletti, Chiara; Eriksson, Anna Maria; Brorson, Ina Skaara et al. (2022). Quantitative proteomics reveals protein dysregulation during T cell activation in multiple sclerosis patients compared to healthy controls. (ekstern lenke)

2021

• Aasebø, Elise; Brenner, Annette; Hernandez-Valladares, Maria et al. (2021). Proteomic Characterization of Spontaneous Stress-Induced In Vitro Apoptosis of Human Acute Myeloid Leukemia Cells; Focus on Patient Heterogeneity and Endoplasmic Reticulum Stress. (ekstern lenke)
• Mosleth, Ellen Færgestad; Vedeler, Christian Alexander; Liland, Kristian Hovde et al. (2021). Cerebrospinal fluid proteome shows disrupted neuronal development in multiple sclerosis. (ekstern lenke)
• Aasebø, Elise; Brenner, Annette; Birkeland, Even et al. (2021). The constitutive extracellular protein release by acute myeloid leukemia cells—A proteomic study of patient heterogeneity and its modulation by mesenchymal stromal cells. (ekstern lenke)
• Oveland, Eystein; Ahmad, Intakhar; Lereim, Ragnhild Reehorst et al. (2021). Cuprizone and EAE mouse frontal cortex proteomics revealed proteins altered in multiple sclerosis. (ekstern lenke)
• Grønningsæter, Ida Sofie; Reikvam, Håkon; Aasebø, Elise et al. (2021). Effects of the autophagy‐inhibiting agent chloroquine on acute myeloid leukemia cells; characterization of patient heterogeneity. (ekstern lenke)
• Aasebø, Elise; Brenner, Annette; Hernandez-Valladares, Maria et al. (2021). Proteomic comparison of bone marrow derived osteoblasts and mesenchymal stem cells. (ekstern lenke)
• Vareecal Joseph, Justin; Magaut, Capucine R.; Storevik, Simon Humberto et al. (2021). TGF-β promotes microtube formation in glioblastoma through thrombospondin 1. (ekstern lenke)
• Hernandez-Valladares, Maria; Wangen, Rebecca; Aasebø, Elise et al. (2021). Proteomic studies of primary acute myeloid leukemia cells derived from patients before and during disease-stabilizing treatment based on all-trans retinoic acid and valproic acid. (ekstern lenke)
• Bjørkum, Alvhild Alette; Duran, Ana Carrasco; Berven, Frode Steingrimsen et al. (2021). Human blood serum proteome changes after 6 hours of sleep deprivation at night. (ekstern lenke)
• Røberg-Larsen, Hanne; Lundanes, Elsa; Nyman, Tuula Anneli et al. (2021). Liquid chromatography, a key tool for the advancement of single-cell omics analysis. (ekstern lenke)
• Aasebø, Elise; Brenner, Annette; Hernandez-Valladares, Maria et al. (2021). Patient Heterogeneity in Acute Myeloid Leukemia: Leukemic Cell Communication by Release of Soluble Mediators and Its Effects on Mesenchymal Stem Cells. (ekstern lenke)

2020

• Aasebø, Elise; Birkeland, Even; Selheim, Frode et al. (2020). The extracellular bone marrow microenvironment — a proteomic comparison of constitutive protein release by in vitro cultured osteoblasts and mesenchymal stem cells. (ekstern lenke)
• Haaland, Ingvild; Aardal, Marit Elisabeth; Berven, Frode Steingrimsen et al. (2020). Changes in the induced sputum proteome during COPD exacerbations. (ekstern lenke)
• Hernandez-Valladares, Maria; Aasebø, Elise; Berven, Frode et al. (2020). Biological characteristics of aging in human acute myeloid leukemia cells: the possible importance of aldehyde dehydrogenase, the cytoskeleton and altered transcriptional regulation. (ekstern lenke)
• Aasebø, Elise; Berven, Frode; Bartaula-Brevik, Sushma et al. (2020). Proteome and Phosphoproteome Changes Associated with Prognosis in Acute Myeloid Leukemia. (ekstern lenke)
• Guldbrandsen, Astrid; Lereim, Ragnhild Reehorst; Jacobsen, Mari et al. (2020). Development of robust targeted proteomics assays for cerebrospinal fluid biomarkers in multiple sclerosis. (ekstern lenke)
• Aasebø, Elise; Berven, Frode; Hovland, Randi et al. (2020). The progression of acute myeloid leukemia from first diagnosis to chemoresistant relapse: A comparison of proteomic and phosphoproteomic profiles. (ekstern lenke)

2019

• Brenner, Annette; Aasebø, Elise; Hernandez-Valladares, Maria et al. (2019). The capacity of long-term in vitro proliferation of acute myeloid leukemia cells supported only by exogenous cytokines is associated with a patient subset with adverse outcome. (ekstern lenke)
• Berge, Tone; Eriksson, Anna; Brorson, Ina S et al. (2019). Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls.. (ekstern lenke)
• Aasebø, Elise; Hernandez-Valladares, Maria; Selheim, Frode et al. (2019). Proteomic profiling of primary human acute myeloid leukemia cells does not reflect their constitutive release of soluble mediators. (ekstern lenke)
• Guldbrandsen, Astrid; Farag, Yehia Mohamed Mokhtar; Lereim, Ragnhild Reehorst et al. (2019). Essential Features and Use Cases of the Cerebrospinal Fluid Proteome Resource (CSF-PR). (ekstern lenke)
• Ahmad, Rushdy; Xie, Liangxia; Pyle, Margaret et al. (2019). A rapid triage test for active pulmonary tuberculosis in adult patients with persistent cough. (ekstern lenke)
• Aasebø, Elise; Berven, Frode; Bartaula-Brevik, Sushma et al. (2019). Proteome and phosphoproteome changes associated with prognosis in acute myeloid leukemia. (ekstern lenke)
• Teodora, Paunas Flavia; Finne, Kenneth; Leh, Sabine Maria et al. (2019). Characterization of glomerular extracellular matrix in IgA nephropathy by proteomic analysis of laser-captured microdissected glomeruli. (ekstern lenke)
• Nepstad, Ina; Hatfield, Kimberley Joanne; Grønningsæter, Ida Sofie et al. (2019). Effects of insulin and pathway inhibitors on the PI3K-Akt-mTOR phosphorylation profile in acute myeloid leukemia cells.. (ekstern lenke)
• Zhang-James, Yanli; Vaudel, Marc; Mjaavatten, Olav et al. (2019). Effect of disease-associated SLC9A9 mutations on protein–protein interaction networks: implications for molecular mechanisms for ADHD and autism. (ekstern lenke)
• Berge, Tone; Eriksson, Anna; Brorson, Ina Skaara et al. (2019). Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls . (ekstern lenke)
• Hernandez-Valladares, Maria; Wangen, Rebecca; Berven, Frode et al. (2019). Protein post-translational modification crosstalk in acute myeloid leukemia calls for action. (ekstern lenke)
• Burger, Bram; Lereim, Ragnhild Reehorst; Berven, Frode et al. (2019). Detecting single amino acids and small peptides by combining isobaric tags and peptidomics. (ekstern lenke)

2018

• Eriksson, Anna; Brorson, Ina Skaara; Høgestøl, Einar August et al. (2018). Proteomic profiling of CD4+ T cells from MS patients show increased activity of T cell activation pathways (compared to healthy controls) . (ekstern lenke)
• Berge, Tone; Brorson, Ina Skaara; Høgestøl, Einar August et al. (2018). Proteomic profiling of CD4+ and CD8+ T cells from multiple sclerosis patients and healthy controls. (ekstern lenke)
• Berge, Tone; Eriksson, Anna; Brorson, Ina Skaara et al. (2018). Proteomic profiling of CD4+ and CD8+ T cells from multiple sclerosis patients and healthy controls. (ekstern lenke)
• Nepstad, Ina; Hatfield, Kimberley Joanne; Aasebø, Elise et al. (2018). Two acute myeloid leukemia patient subsets are identified based on the constitutive PI3K-Akt-mTOR signaling of their leukemic cells; a functional, proteomic and transcriptomic comparison. (ekstern lenke)
• Jacobsen, Mari; Berven, Frode; Guldbrandsen, Astrid (2018). Development and Use of Mass Spectrometry Based Quantitative Proteomics Assays for Multiple Sclerosis Biomarker Candidates. (ekstern lenke)
• Berge, Tone; Eriksson, Anna; Brorson, Ina Skaara et al. (2018). Proteomic profiling of T cells from multiple sclerosis patients and healthy controls. (ekstern lenke)
• Yang, Mingxing; Kohler, Maxie; Heyder, Tina et al. (2018). Proteomic profiling of lung immune cells reveals dysregulation of phagocytotic pathways in female-dominated molecular COPD phenotype. (ekstern lenke)
• Yang, Mingxing; Kohler, Maxie; Heyder, Tina et al. (2018). Long-term smoking alters abundance of over half of the proteome in bronchoalveolar lavage cell in smokers with normal spirometry, with effects on molecular pathways associated with COPD. (ekstern lenke)

2017

• Bjørkum, Alvhild Alette; Oveland, Eystein; Stuhr, Linda Elin Birkhaug et al. (2017). Fast hyperbaric decompression after heliox saturation altered the brain proteome in rats. (ekstern lenke)
• Hernandez-Valladares, Maria; Vaudel, Marc; Selheim, Frode et al. (2017). Proteogenomics approaches for studying cancer biology and their potential in the identification of acute myeloid leukemia biomarkers. (ekstern lenke)
• Forthun, Rakel Brendsdal; Aasebø, Elise; Rasinger, Josef Daiel et al. (2017). Phosphoprotein DIGE profiles reflect blast differentiation, cytogenetic risk stratification, FLT3/NPM1 mutations and therapy response in acute myeloid leukaemia. (ekstern lenke)
• Oveland, Eystein; Nystad, Agnes Elisabeth; Berven, Frode et al. (2017). 1,25-Dihydroxyvitamin-D3 induces brain proteomic changes in cuprizone mice during remyelination involving calcium proteins. (ekstern lenke)
• Verheggen, Kenneth; Ræder, Helge; Berven, Frode et al. (2017). Anatomy and evolution of database search engines—a central component of mass spectrometry based proteomic workflows. (ekstern lenke)
• Yadetie, Fekadu; Oveland, Eystein; Døskeland, Anne Marie Simonne et al. (2017). Quantitative proteomics analysis reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with PCB 153. (ekstern lenke)
• Nygaard, Gyrid; Herfindal, Lars; Sivertsen Åsrud, Kathrine et al. (2017). Epac1-deficient mice have bleeding phenotype and thrombocytes with decreased GPIbβ expression. (ekstern lenke)
• Paunas, Theodora Ioana; Finne, Kenneth; Leh, Sabine Maria et al. (2017). Glomerular abundance of complement proteins characterized by proteomic analysis of laser-captured microdissected glomeruli associates with progressive disease in IgA nephropathy. (ekstern lenke)
• Brenner, Annette; Aasebø, Elise; Hernandez-Valladares, Maria et al. (2017). Rethinking the role of osteopontin in human acute myeloid leukemia. (ekstern lenke)
• Kroksveen, Ann Cathrine; Guldbrandsen, Astrid; Vaudel, Marc et al. (2017). In-depth cerebrospinal fluid quantitative proteome and deglycoproteome analysis: presenting a comprehensive picture of pathways and processes affected by multiple sclerosis. (ekstern lenke)
• Yadetie, Fekadu; Eide, Marta; Oveland, Eystein et al. (2017). Integrative transcriptome and proteome analysis reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with PCB 153. (ekstern lenke)

2016

• Finne, Kenneth; Marti, Hans-Peter; Leh, Sabine Maria et al. (2016). Proteomic Analysis of Minimally Damaged Renal Tubular Tissue from Two-Kidney-One-Clip Hypertensive Rats Demonstrates Extensive Changes Compared to Tissue from Controls. (ekstern lenke)
• Aasebø, Elise; Forthun, Rakel Brendsdal; Berven, Frode et al. (2016). Global cell proteome profiling, phospho-signaling and quantitative proteomics for identification of new biomarkers in acute myeloid leukemia patients. (ekstern lenke)
• Vaudel, Marc; Barsnes, Harald; Bjerkvig, Rolf et al. (2016). Practical considerations for omics experiments in biomedical sciences. (ekstern lenke)
• Hernandez-Valladares, Maria; Aasebø, Elise; Mjaavatten, Olav et al. (2016). Reliable FASP-based procedures for optimal quantitative proteomic and phosphoproteomic analysis on samples from acute myeloid leukemia patients. (ekstern lenke)
• Aasebø, Elise; Mjaavatten, Olav; Vaudel, Marc et al. (2016). Freezing effects on the acute myeloid leukemia cell proteome and phosphoproteome revealed using optimal quantitative workflows. (ekstern lenke)
• Guldbrandsen, Astrid; Berven, Frode; Kroksveen, Ann Cathrine et al. (2016). Proteome and deglycopeptide analyses of neurologically healthy and multiple sclerosis affected cerebrospinal fluid: Mass spectrometry experiments, literature mining and data sharing . (ekstern lenke)
• Aasebø, Elise; Berven, Frode (2016). Mass spectrometry-based proteome quantification in leukemic cells from acute myeloid leukemia patients. (ekstern lenke)
• Vaudel, Marc; Barsnes, Harald; Ræder, Helge et al. (2016). Using Proteomics Bioinformatics Tools and Resources in Proteogenomic Studies. (ekstern lenke)
• Hernandez Sanchez, Luis Francisco; Aasebø, Elise; Selheim, Frode et al. (2016). Systemic Analysis of Regulated Functional Networks. (ekstern lenke)
• Lereim, Ragnhild Reehorst; Oveland, Eystein; Xiao, Y. et al. (2016). The Brain Proteome of the Ubiquitin Ligase Peli1 Knock-Out Mouse during Experimental Autoimmune Encephalomyelitis. (ekstern lenke)
• Guldbrandsen, Astrid; Farag, Yehia Mohamed Mokhtar; Kroksveen, Ann Cathrine et al. (2016). CSF-PR 2.0: an interactive literature guide to quantitative cerebrospinal fluid mass spectrometry data from neurodegenerative disorders. (ekstern lenke)
• Muth, Thilo; Rapp, Erdmann; Berven, Frode et al. (2016). Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics. (ekstern lenke)
• Yadetie, Fekadu; Bjørneklett, Silje; Garberg, Hilde Kristin et al. (2016). Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism. (ekstern lenke)
• Karlsen, Odd Andre; Yadetie, Fekadu; Eide, Marta et al. (2016). Integrative -omics analyses reveal perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) exposed to the persistent organic pollutant PCB 153. (ekstern lenke)
• Yadetie, Fekadu; Eide, Marta; Oveland, Eystein et al. (2016). Integrated analysis of transcriptome and proteome reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with the persistent organic pollutant PCB 153 . (ekstern lenke)
• Opsahl, Jill Anette; Vaudel, Marc; Guldbrandsen, Astrid et al. (2016). Label-free analysis of human cerebrospinal fluid addressing various normalization strategies and revealing protein groups affected by multiple sclerosis. (ekstern lenke)
• Vaudel, Marc; Verheggen, Kenneth; Csordas, Attila et al. (2016). Exploring the potential of public proteomics data. (ekstern lenke)
• Tveit, Vegard; Berven, Frode; Guldbrandsen, Astrid et al. (2016). Glycopeptide analysis and glycan structure inference from mass spectrometry data-Investigating the potential of computational glycan structure analysis in biomedical research. (ekstern lenke)
• Hernandez-Valladares, Maria; Aasebø, Elise; Selheim, Frode et al. (2016). Selecting Sample Preparation Workflows for Mass Spectrometry-Based Proteomic and Phosphoproteomic Analysis of Patient Samples with Acute Myeloid Leukemia . (ekstern lenke)
• Lereim, Ragnhild Reehorst; Oveland, Eystein; Berven, Frode et al. (2016). Visualization, Inspection and Interpretation of Shotgun Proteomics Identification Results. (ekstern lenke)
• Verheggen, Kenneth; Martens, Lennart; Berven, Frode et al. (2016). Database Search Engines: Paradigms, Challenges and Solutions.. (ekstern lenke)
• Aasebø, Elise; Berven, Frode; Selheim, Frode et al. (2016). Interpretation of Quantitative Shotgun Proteomic Data. (ekstern lenke)
• Guldbrandsen, Astrid; Barsnes, Harald; Kroksveen, Ann Cathrine et al. (2016). A Simple Workflow for Large Scale Shotgun Glycoproteomics. (ekstern lenke)

2015

• Vaudel, Marc; Burkhart, Julia M.; Zahedi, René P. et al. (2015). PeptideShaker enables reanalysis of MS-derived proteomics data sets. (ekstern lenke)
• Wang, Xiangdong; Zhang, Yong; Nilsson, Carol L. et al. (2015). Association of chromosome 19 to lung cancer genotypes and phenotypes. (ekstern lenke)
• Wang, Xiangdong; Zhang, Yong; Nilsson, Carol L. et al. (2015). Erratum to: Association of chromosome 19 to lung cancer genotypes and phenotypes. (ekstern lenke)
• Oveland, Eystein; Muth, Thilo; Rapp, Erdmann et al. (2015). Viewing the proteome: How to visualize proteomics data?. (ekstern lenke)
• Horvatovich, Péter; Végvári, Ákos; Saul, Justin et al. (2015). In vitro transcription/translation system: A versatile tool in the search for missing proteins. (ekstern lenke)
• Wheelock, Åsa M.; Paulson, Linda; Litton, Jan-Eric et al. (2015). The EuPA Biobank Initiative: Meeting the future challenges of biobanking in proteomics & systems medicine. (ekstern lenke)
• Farag, Yehia Mohamed Mokhtar; Berven, Frode; Jonassen, Inge et al. (2015). Distributed and interactive visual analysis of omics data. (ekstern lenke)
• Kroksveen, Ann Cathrine; Opsahl, Jill Anette; Guldbrandsen, Astrid et al. (2015). Cerebrospinal fluid proteomics in multiple sclerosis. (ekstern lenke)
• Kroksveen, Ann Cathrine; Jaffe, Jacob D.; Aasebø, Elise et al. (2015). Quantitative proteomics suggests decrease in the secretogranin-1 cerebrospinal fluid levels during the disease course of multiple sclerosis. (ekstern lenke)
• Nilsson, Carol L.; Mostovenko, Ekaterina; Lichti, Cheryl F. et al. (2015). Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome. (ekstern lenke)

2014

• Lereim, Ragnhild Reehorst; Oveland, Eystein; Berven, Frode (2014). Establishment and usage of quantitative brain proteomics to investigate the role of Peli1 E3 ubiquitin ligase in the EAE mouse model of multiple sclerosis. (ekstern lenke)
• Mahootchi, Elaheh; Kroksveen, Ann Cathrine; Opsahl, Jill Anette et al. (2014). Label-free proteomics analysis of plasma to discover proteins with differential abundance between multiple sclerosis patients and controls. (ekstern lenke)
• Vaudel, Marc; Venne, A. Saskia; Berven, Frode et al. (2014). Shedding light on black boxes in protein identification. (ekstern lenke)
• Lichti, Cheryl F.; Liu, Huiling; Shavkunov, Alexander S. et al. (2014). Integrated chromosome 19 transcriptomic and proteomic data sets derived from glioma cancer stem-cell lines. (ekstern lenke)
• Haaland, Ingvild; Opsahl, Jill Anette; Berven, Frode et al. (2014). Molecular mechanisms of nutlin-3 involve acetylation of p53, histones and heat shock proteins in acute myeloid leukemia. (ekstern lenke)
• Finne, Kenneth; Vethe, Heidrun; Skogstrand, Trude et al. (2014). Proteomic analysis of formalin-fixed paraffin-embedded glomeruli suggests depletion of glomerular filtration barrier proteins in two-kidney one-clip hypertensive rats. (ekstern lenke)
• Vaudel, Marc; Barsnes, Harald; Martens, Lennart et al. (2014). Bioinformatics for Proteomics: Opportunities at the interface between the scientists, their experiments and the community. (ekstern lenke)
• Bjørlykke, Yngvild; Vethe, Heidrun; Vaudel, Marc et al. (2014). Carboxyl-ester lipase maturity-onset diabetes of the young disease protein biomarkers in secretin-stimulated duodenal juice. (ekstern lenke)
• Aasebø, Elise; Opsahl, Jill Anette; Bjørlykke, Yngvild et al. (2014). Effects of blood contamination and the rostro-caudal gradient on the human cerebrospinal fluid proteome. (ekstern lenke)
• Guldbrandsen, Astrid; Vethe, Heidrun; Farag, Yehia Mohamed Mokhtar et al. (2014). In-depth characterization of the cerebrospinal fluid (CSF) proteome displayed through the CSF proteome resource (CSF-PR). (ekstern lenke)
• Aasebø, Elise; Vaudel, Marc; Mjaavatten, Olav et al. (2014). Performance of super-SILAC based quantitative proteomics for comparison of different acute myeloid leukemia (AML) cell lines. (ekstern lenke)
• Helgeland, Erik; Breivik, Lars Ertesvåg; Vaudel, Marc et al. (2014). Exploring the human plasma proteome for humoral mediators of remote ischemic preconditioning - A word of caution. (ekstern lenke)

2013

• Kroksveen, Ann Cathrine; Aasebø, Elise; Vethe, Heidrun et al. (2013). Discovery and initial verification of differentially abundant proteins between multiple sclerosis patients and controls using iTRAQ and SID-SRM. (ekstern lenke)
• Finne, Kenneth; Skogstrand, Trude; Tenstad, Olav et al. (2013). Proteomic analysis of outer and juxtamedullary cortex of non-clipped kidneys in 2K1C hypertensive rats. (ekstern lenke)
• Berle, Magnus Foldal; Kroksveen, Ann Cathrine; Garberg, Hilde Kristin et al. (2013). Quantitative proteomics comparison of arachnoid cyst fluid and cerebrospinal fluid collected perioperatively from arachnoid cyst patients. (ekstern lenke)
• Teunissen, Charlotte E.; Menge, Til; Altintas, Ayse et al. (2013). Consensus definitions and application guidelines for control groups in cerebrospinal fluid biomarker studies in multiple sclerosis. (ekstern lenke)
• Malm, Johan; Fehninger, T.E.; Danmyr, Pia et al. (2013). Developments in biobanking workflow standardization providing sample integrity and stability. (ekstern lenke)
• Nilsson, Carol L.; Berven, Frode; Selheim, Frode et al. (2013). Chromosome 19 annotations with disease speciation: a first report from the Global Research Consortium. (ekstern lenke)

2012

• Aye, Thin Thin; Low, Teck Yew; Bjørlykke, Yngvild et al. (2012). Use of stable isotope dimethyl labeling coupled to selected reaction monitoring to enhance throughput by multiplexing relative quantitation of targeted proteins. (ekstern lenke)
• Berven, Frode; Vethe, Heidrun; Selheim, Frode (2012). Mass spectrometry-based proteomics of human cerebrospinal fluid Biomarker discovery and verification in multiple sclerosis. (ekstern lenke)
• Guldbransen, Astrid; Berven, Frode; Selheim, Frode (2012). Glycoproteomics in Human Cerebrospinal Fluid Mapping the CSF Proteome, and Biomarker Discovery and Qualification in Multiple Sclerosis. (ekstern lenke)
• Kroksveen, Ann Cathrine; Guldbrandsen, Astrid; Vedeler, Christian A. et al. (2012). Cerebrospinal fluid proteome comparison between multiple sclerosis patients and controls. (ekstern lenke)
• Mjaavatten, Olav; Nygaard, Gyrid; Berven, Frode et al. (2012). Minimization of side reactions during Lys Tag derivatization of C-terminal lysine peptides. (ekstern lenke)
• Haugland, Gyri Teien; Rønneseth, Anita; Berven, Frode et al. (2012). Global proteomic analyses of fish leukocytes during pathogen infections.. (ekstern lenke)

2011

• Eijsink, Vincent; Berven, Frode (2011). The field of proteomics in Norway. (ekstern lenke)
• Berle, Magnus Foldal; Kroksveen, Ann Cathrine; Haaland, Øystein et al. (2011). Protein profiling reveals inter-individual protein homogeneity of arachnoid cyst fluid and high qualitative similarity to cerebrospinal fluid. (ekstern lenke)
• Arntzen, Magnus; Koehler, Christian; Barsnes, Harald et al. (2011). IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT. (ekstern lenke)
• Kroksveen, Ann Cathrine; Opsahl, Jill Anette; Aye, Thin Thin et al. (2011). Proteomics of human cerebrospinal fluid: Discovery and verification of disease biomarker candidates in neurodegenerative diseases using quantitative proteomics. (ekstern lenke)
• Arntzen, Magnus; Koehler, Christian; Barsnes, Harald et al. (2011). IsobariQ: Software for Isobaric Quantitative Proteomics using IPTL, iTRAQ, and TMT. (ekstern lenke)
• Kamil, Atif; Falk, Knut; Sharma, Animesh et al. (2011). A monoclonal antibody distinguishes between two IgM heavy chain isotypes in Atlantic salmon and brown trout: Protein characterization, 3D modeling and epitope mapping. (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Jensen, Harald B et al. (2011). METHANOTROPH OUTER MEMBRANE PREPARATION. (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Bagstevold, June Iren Larsen| et al. (2011). Methylococcus capsulatus (Bath): From Genome to Protein Function, and Vice Versa. (ekstern lenke)
• Vaudel, Marc; Barsnes, Harald; Berven, Frode et al. (2011). SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches. (ekstern lenke)
• Barsnes, Harald; Vaudel, Marc; Colaert, Niklaas et al. (2011). compomics-utilities: an open-source Java library for computational proteomics. (ekstern lenke)
• Bjørlykke, Yngvild; Berven, Frode; Selheim, Frode (2011). Proteomics in Cerebrospinal fluid: Finding proteins highly enriched in CSF, proteins influenced by the rostro-caudal gradient, and biomarker verification in Multiple Sclerosis. (ekstern lenke)
• Aasebø, Elise; Berven, Frode; Selheim, Frode (2011). A proteomics study of Cerebrospinal fluid in relation to biomarker discovery and verification in Multiple Sclerosis, with emphasis on the effect of pre-analytical factors. (ekstern lenke)

2010

• Teunissen, Charlotte; Tumani, HT; Bennett, JL et al. (2010). Short commentary on 'a consensus protocol for the standardization of cerebrospinal fluid collection and biobanking'. (ekstern lenke)
• Berle, Magnus Foldal; Wester, Knut; Ulvik, Rune Johan et al. (2010). Arachnoid cysts do not contain cerebrospinal fluid: A comparative chemical analysis of arachnoid cyst fluid and cerebrospinal fluid in adults. (ekstern lenke)
• Teunissen, Charlotte E.; Petzold, Axel; Bennett, Jeffrey L. et al. (2010). A consensus protocol for the standardisation of cerebrospinal fluid collection and biobanking. (ekstern lenke)
• Kvalheim, Tarja Anniki Rajalahti; Kroksveen, Ann Cathrine; Arneberg, Reidar et al. (2010). A multivariate approach to reveal biomarker signatures for disease classification: application to mass spectral profiles of cerebrospinal fluid from patients with multiple sclerosis. (ekstern lenke)
• Berven, Frode; Ahmad, Rushdy; Clouser, Karl R. et al. (2010). Optimizing performance of glycopeptide capture for plasma proteomics. (ekstern lenke)

2009

• Teunissen, Charlotte E.; Petzold, Andreas; Bennett, Jeffrey L. et al. (2009). A consensus protocol for the standardization of cerebrospinal fluid collection and biobanking. (ekstern lenke)
• Rajalahti, Tarja; Arneberg, Reidar; Berven, Frode et al. (2009). Biomarker discovery in mass spectral profiles by means of selectivity ratio plot. (ekstern lenke)
• Tumani, Hayrettin; Hartung, Hans-Peter; Hemmer, Bernhard et al. (2009). Cerebrospinal fluid biomarkers in multiple sclerosis. (ekstern lenke)
• Berven, Frode (2009). Discovery of novel diagnostic biomarker candidates for multiple sclerosis through clinical proteomics. (ekstern lenke)

2008

• Rajalahti, Tarja; Arneberg, Reidar; Berven, Frode et al. (2008). Biomarker discovery from mass spectral profiles: A combined proteomics and multivariate analysis. (ekstern lenke)
• Rajalahti, Tarja; Arneberg, Reidar; Berven, Frode et al. (2008). Early diagnosis and biomarker discovery from mass spectral profiles: application to multiple sclerosis. (ekstern lenke)
• Målen, Hiwa; Berven, Frode; Søfteland, Tina et al. (2008). Membrane- and membrane associated proteins in Triton X-114 extracts of Mycobacterium bovis BCG identified using a combination of gel-based and gel-free fractionation strategies. (ekstern lenke)
• Målen, Hiwa; Berven, Frode; Søfteland, Tina et al. (2008). Membrane- and membrane-associated proteins in Triton X-114 extracts of Mycobacterium bovis BCG identified using a combination of gel-based and gel-free fractionation strategies. (ekstern lenke)
• Målen, Hiwa; Berven, Frode; Søfteland, Tina et al. (2008). Membrane- and membrane-associated proteins in Triton X-114 extracts of Mycobacterium bovis BCG identified using a combination of gel-based and gel-free fractionation strategies. (ekstern lenke)

2007

• Berven, Frode; Kroksveen, Ann Cathrine; Berle, Magnus Foldal et al. (2007). Pre-analytical influence on the low molecular weight cerebrospinal fluid proteome. (ekstern lenke)
• Målen, Hiwa; Berven, Frode; Fladmark, Kari Espolin et al. (2007). Comprehensive analysis of exported proteins from Mycobacterium tuberculosis H37Rv. (ekstern lenke)
• Arneberg, Reidar; Rajalahti, Tarja; Flikka, Kristian et al. (2007). Pretreatment of mass spectral profiles: Application to proteomic data. (ekstern lenke)
• Rajalahti, Tarja; Arneberg, Reidar; Flikka, Kristian et al. (2007). Preteatment of Mass Spectral Profiles: Application to proteomic data. (ekstern lenke)
• Kvalheim, Olav Martin; Rajalahti, Tarja; Arneberg, Reidar et al. (2007). Analysis of Proteomic Profiles. (ekstern lenke)
• Kvalheim, Olav Martin; Rajalahti, Tarja; Arneberg, Reidar et al. (2007). Target projection and proper data pre-treatment for the analysis of proteomic profiles. (ekstern lenke)
• Olausson, Sara Karolina; Berven, Frode; Ulvik, Rune Johan (2007). Proteomics applied on cerebrospinal fluid, with focus on methods development and candidate biomarker discovery in multiple sclerosis patients. (ekstern lenke)

2006

• Berven, Frode; Flikka, Kristian; Berle, Magnus Foldal et al. (2006). Proteomic-based biomarker discovery with emphasis on cerebrospinal fluid and multiple sclerosis. (ekstern lenke)
• Aukrust, Ingvild; Evensen, Lasse; Hollås, Hanne et al. (2006). Engineering, biophysical characterisation and binding properties of a soluble mutant form of annexin A2 domain IV that adopts a partially folded conformation. (ekstern lenke)
• Berven, Frode; Karlsen, Odd Andre; Straume, Anne Hege et al. (2006). Analysing the outer membrane subproteome of Methylococcus capsulatus (Bath) using proteomics and novel biocomputing tools. (ekstern lenke)
• Wiker, Harald G; Målen, Hiwa; Berven, Frode et al. (2006). Late breaker: Revealing the secreted proteome of Mycobacterium tuberculosis H37Rv. (ekstern lenke)
• Berven, Frode; Målen, Hiwa; Fladmark, Kari Espolin et al. (2006). Comparing the protein identifications obtained using two-dimensional gel electrophoresis or liquid chromatography mass spectrometry on the secreted proteome of Mycobacterium tuberculosis. (ekstern lenke)

2005

• Karlsen, Odd Andre; Ramsevik, Linda; Bruseth, Live J. et al. (2005). Characterisation of a prokaryotic hemerythrin from the methanotrophic bacterium Methylococcus capsulatus (Bath). (ekstern lenke)
• Berven, Frode; Jensen, Harald B; Lillehaug, Johan (2005). Analysing the outer membrane and subproteome of Methylococcus capsulatus (Bath) using proteomics and bioinformatics. (ekstern lenke)

2004

• Berven, Frode; Flikka, Kristian; Jensen, Harald B et al. (2004). BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. (ekstern lenke)
• Straume, Anne Hege; Jensen, Harald B; Berven, Frode et al. (2004). Methylococcus capsulatus (Bath); Molecular analyses of a surface exposed heteromultimeric protein complex. (ekstern lenke)

2003

• Berven, Frode; Karlsen, Odd Andre; Murrell, Colin et al. (2003). Multiple polypeptide forms observed in two-dimensional gels of Methylococcus capsulatus (Bath) polypeptides are generated during the separation procedure. (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Stafford, Grasham et al. (2003). The surface-associated and secreted MopE protein of Methylococcus capsulatus (Bath) responds to changes in the concentration of copper in the growth medium. (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Bruseth, Live Janicke et al. (2003). The expression of the surface associated MopE protein of Methylococcus capsulatus (Bath) is regulated by the concentration of copper in the growth medium. (ekstern lenke)
• Berven, Frode; Karlsen, Odd Andre; Fjellbirkeland, Anne et al. (2003). Proteome studies on the methanotrophic bacterium Methylococcus capsulatus (Bath). (ekstern lenke)
• Berven, Frode; Karlsen, Odd Andre; Murrell, Colin et al. (2003). Multiple polypeptide forms observed in twodimensional gels of Methylococcus capsulatus (Bath)polypeptides are generated during the separation procedure. (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Larsen, Øivind et al. (2003). Differential expression in sMMO and pMMO producing cells of Methylococcus capsulatus (Bath). (ekstern lenke)
• Karlsen, Odd Andre; Berven, Frode; Larsen, Øivind et al. (2003). Identification of the ORF upstream of MopE in Methylococcus capsulatus. (ekstern lenke)

2002

• Hordvik, Ivar; Berven, Frode; Solem, Stein Tore et al. (2002). Analysis of two IgM isotypes in Atlantic salmon and brown trout. (ekstern lenke)
• Berven, Frode; Karlsen, Odd Andre; Jensen, Harald B (2002). Initial proteome studies of Methylococcus capsulatus (Bath). (ekstern lenke)
• Fjellbirkeland, Anne; Karlsen, Odd Andre; Berven, Frode et al. (2002). Characterization of copper-repressible extracellular protein of Methylococcus capsulatus (Bath). (ekstern lenke)
• Berven, Frode; Karlsen, Odd Andre; Jensen, Harald B (2002). Initial proteome studies on Methylococcus capsulatus (Bath). (ekstern lenke)

2001

• Berven, Frode (2001). The establishement and use of 2-dimensional gel electrophoresis in proteome studies of Methylococcus capsulatus(Bath). (ekstern lenke)

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