Academic article

• Ngoumelah, Daniel Dzofou; Heggeset, Tonje Marita Bjerkan; Haugen, Tone et al. (2024). Effect of model methanogens on the electrochemical activity, stability, and microbial community structure of Geobacter spp. dominated biofilm anodes. (external link)
• Ngoumelah, Daniel Dzofou; Harnisch, Falk; Sulheim, Snorre et al. (2023). A unified and simple medium for growing model methanogens. (external link)
• Dukovski, Ilija; Bajić, Djordje; Chacón, Jeremy M. et al. (2021). A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS). (external link)
• Ofaim, Shany; Sulheim, Snorre; Almaas, Eivind et al. (2021). Dynamic Allocation of Carbon Storage and Nutrient-Dependent Exudation in a Revised Genome-Scale Model of Prochlorococcus. (external link)
• Sulheim, Snorre; Fossheim, Fredrik A.; Wentzel, Alexander et al. (2021). Automatic reconstruction of metabolic pathways from identified biosynthetic gene clusters. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Dissel, Dino van et al. (2020). Enzyme-Constrained Models and Omics Analysis of Streptomyces coelicolor Reveal Metabolic Changes that Enhance Heterologous Production. (external link)
• Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander et al. (2019). Predicting strain engineering strategies using iKS1317: a genome-scale metabolic model of Streptomyces coelicolor. (external link)

Errata

• Ngoumelah, Daniel Dzofou; Heggeset, Tonje Marita Bjerkan; Haugen, Tone et al. (2024). Author Correction: Effect of model methanogens on the electrochemical activity, stability, and microbial community structure of Geobacter spp. dominated biofilm anodes (npj Biofilms and Microbiomes, (2024), 10, 1, (17), 10.1038/s41522-024-00490-z). (external link)

Lecture

• Sulheim, Snorre (2021). Hvordan kan vi bruke matematiske modeller til å designe mikrobiomer?. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2017). New bioactive compounds from environmental microbial resources by an integrated functional (meta)genomics approach. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2017). New bioactive compounds from environmental microbial resources by an integrated functional (meta)genomics approach. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2017). New bioactive compounds from environmental microbial resources by an integrated functional (meta)genomics approach. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2017). New bioactive compounds from environmental microbial resources by an integrated functional (meta)genomics approach. (external link)

Academic literature review

• Ankrah, N.Y.D; Bernstein, David B.; Biggs, Matthew et al. (2021). Enhancing Microbiome Research through Genome-Scale Metabolic Modeling. (external link)
• Bernstein, David B.; Sulheim, Snorre; Almaas, Eivind et al. (2021). Addressing uncertainty in genome-scale metabolic model reconstruction and analysis. (external link)

Poster

• Sulheim, Snorre; Kumelj, Tjasa; Dissel, Dino van et al. (2021). A systems comparison of Streptomyces coelicolor M1152 and M145 reveals major metabolic rewiring. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Salehzadeh-Yazdi, Ali et al. (2019). An enzyme-constrained genome-scale metabolic model of Streptomyces coelicolor reveals global effects of gene cluster deletion and rpoB mutation. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Sletta, Håvard et al. (2018). Predicting phenotypes using iKS1317: a genome-scale metabolic model of Streptomyces coelicolor. (external link)
• Sulheim, Snorre; Degnes, Kristin Fløgstad; Nguyen, Giang-Son et al. (2018). A network approach to efficient drug discovery. (external link)
• Sulheim, Snorre; Wentzel, Alexander; Almaas, Eivind (2018). Modelling the metabolic switch S. coelicolor triggered by phosphate depletion. (external link)
• Degnes, Kristin Fløgstad; Nguyen, Giang-Son; Sulheim, Snorre et al. (2018). Novel insights into the natural product potential of a marine Actinobacteria strain collection by combining classical and genomics-based bioprospecting. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander et al. (2017). Extended GEM of Streptomyces coelicolor for production of secondary metabolites. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander et al. (2017). A genome-scale metabolic model for Streptomyces coelicolor. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander et al. (2017). A genome-scale metabolic model for Streptomyces coelicolor. (external link)
• Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander et al. (2017). A genome-scale metabolic model for Streptomyces coelicolor. (external link)
• Sulheim, Snorre; Almaas, Eivind; Kumelj, Tjasa (2017). A genome-scale metabolic reconstruction of S. coelicolor. (external link)

Academic lecture

• Sulheim, Snorre; A., Fossheim Fredrik; Almaas, Eivind (2020). Automatic reconstruction of metabolic pathways from annotated biosynthetic gene clusters. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2019). Expanding the (meta)genomics toolbox for the discovery and production of novel natural products from microbial resources. (external link)
• Wentzel, Alexander; Lewin, Anna; Nordborg, Anna et al. (2019). Expanding the (meta)genomics toolbox for the discovery and production of novel natural products from microbial resources. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander et al. (2017). A genome-scale metabolic model for Streptomyces coelicolor. (external link)
• Sulheim, Snorre; Kumelj, Tjasa; Wentzel, Alexander et al. (2017). A genome-scale metabolic model for Streptomyces coelicolor. (external link)
• Kumelj, Tjasa; Sulheim, Snorre; Wentzel, Alexander et al. (2017). Extended GEM of Streptomyces coelicolor for production of secondary metabolites. (external link)

See a complete overview of publications in Cristin.