Vitenskapelig artikkel

• D’Altri, Teresa; Freeberg, Mallory Ann; Curwin, Amy J. et al. (2025). The Federated European Genome–Phenome Archive as a global network for sharing human genomics data. (ekstern lenke)
• Rao, Shreesha Sadashiva; Lunde, Harald Sæbø; Dolan, David William Peter et al. (2023). Transcriptome-wide analyses of early immune responses in lumpfish leukocytes upon stimulation with poly(I:C). (ekstern lenke)
• Nido, Gonzalo Sanchez; Dick, Fiona; Toker, Lilah et al. (2020). Common gene expression signatures in Parkinson’s disease are driven by changes in cell composition. (ekstern lenke)
• Sundstrøm, Terje; Prestegarden, Lars; Azuaje, Francisco et al. (2019). Inhibition of mitochondrial respiration prevents BRAF-mutant melanoma brain metastasis. (ekstern lenke)
• Kusonmano, Kanthida; Halle, Mari Kyllesø; Wik, Elisabeth et al. (2018). Identification of highly connected and differentially expressed gene subnetworks in metastasizing endometrial cancer. (ekstern lenke)
• Eggestøl, Håvard Øritsland; Lunde, Harald Sæbø; Rønneseth, Anita et al. (2018). Transcriptome-wide mapping of signaling pathways and early immune responses in lumpfish leukocytes upon in vitro bacterial exposure. (ekstern lenke)
• Tekle, Kidane M; Gundersen, Sveinung; Klepper, Kjetil et al. (2018). Norwegian e-Infrastructure for Life Sciences (NeLS). (ekstern lenke)
• Leiss, Lina Wik; Mutlu, Ercan; Øyan, Anne Margrete et al. (2017). Tumour-associated glial host cells display a stem-like phenotype with a distinct gene expression profile and promote growth of GBM xenografts. (ekstern lenke)
• Stokowy, Tomasz; Garbulowski, Mateusz; Fiskerstrand, Torunn et al. (2016). RareVariantVis: New tool for visualization of causative variants in rare monogenic disorders using whole genome sequencing data. (ekstern lenke)
• Martin-Almedina, Silvia; Martinez-Corral, Ines; Holdhus, Rita et al. (2016). EPHB4 kinase-inactivating mutations cause autosomal dominant lymphatic-related hydrops fetalis. (ekstern lenke)
• Tønne, Elin; Holdhus, Rita; Stansberg, Christine et al. (2015). Syndromic X-linked intellectual disability segregating with a missense variant in RLIM. (ekstern lenke)
• Farag, Yehia Mohamed Mokhtar; Berven, Frode; Jonassen, Inge et al. (2015). Distributed and interactive visual analysis of omics data. (ekstern lenke)
• Høivik, Erling Andre; Kusonmano, Kanthida; Halle, Mari Kyllesø et al. (2014). Hypomethylation of the CTCFL/BORIS promoter and aberrant expression during endometrial cancer progression suggests a role as an Epi-driver gene. (ekstern lenke)
• Pagarete, António; Kusonmano, Kanthida; Petersen, Kjell et al. (2014). Dip in the gene pool: Metagenomic survey of natural coccolithovirus communities. (ekstern lenke)
• Wik, Elisabeth; Trovik, Jone; Kusonmano, Kanthida et al. (2014). Endometrial Carcinoma Recurrence Score (ECARS) validates to identify aggressive disease and associates with markers of epithelial-mesenchymal transition and PI3K alterations. (ekstern lenke)
• Tangen, Ingvild Løberg; Krakstad, Camilla; Halle, Mari Kyllesø et al. (2014). Switch in FOXA1 status associates with endometrial cancer progression. (ekstern lenke)
• Seehuus, Siri-Christine; Taylor, Simon; Petersen, Kjell et al. (2013). Somatic maintenance resources in the honeybee worker fat body are distributed to withstand the most life-threatening challenges at each life stage. (ekstern lenke)
• Werner, Henrica Maria Johanna; Berg, Anna; Wik, Elisabeth et al. (2013). ARID1A loss is prevalent in endometrial hyperplasia with atypia and low-grade endometrioid carcinomas. (ekstern lenke)
• Tysnes, Berit Bølge; Sætran, Hege Aase; Mørk, Sverre et al. (2013). Age-dependent association between protein expression of the embryonic stem cell marker Cripto-1 and survival of glioblastoma patients. (ekstern lenke)
• Wik, Elisabeth; Birkeland, Even; Trovik, Jone et al. (2013). High phospho-stathmin(Serine38) expression identifies aggressive endometrial cancer and suggests an association with PI3K inhibition. (ekstern lenke)
• Petersen, Kjell; Rajcevic, Uros; Rahim, Siti Aminah Abdul et al. (2013). Gene set based integrated data analysis reveals phenotypic differences in a brain cancer model. (ekstern lenke)
• Subramanian, Sattanathan; Sztromwasser, Pawel Szymon; Puntervoll, Pål et al. (2013). Pipelined data-flow delegated orchestration for data-intensive eScience workflows. (ekstern lenke)
• Krakstad, Camilla; Birkeland, Even; Seidel, Danila et al. (2012). High-throughput mutation profiling of primary and metastatic endometrial cancers identifies KRAS, FGFR2 and PIK3CA to be frequently mutated. (ekstern lenke)
• Birkeland, Even; Wik, Elisabeth; Mjøs, Siv et al. (2012). KRAS gene amplification and overexpression but not mutation associates with aggressive and metastatic endometrial cancer. (ekstern lenke)
• Reikvam, Håkon; Hatfield, Kimberley Joanne; Ersvær, Elisabeth et al. (2012). Expression profile of heat shock proteins in acute myeloid leukaemia patients reveals a distinct signature strongly associated with FLT3 mutation status - consequences and potentials for pharmacological intervention. (ekstern lenke)
• Søfteland, Liv Ingeborg Rosvoll; Petersen, Kjell; Stavrum, Anne-Kristin et al. (2011). Hepatic in vitro toxicity assessment of PBDE congeners BDE47, BDE153 and BDE154 in Atlantic salmon (Salmo salar L.). (ekstern lenke)
• Apelseth, Torunn Oveland; Hervig, Tor; Wentzel-Larsen, Tore et al. (2011). A prospective observational study of the effect of platelet transfusions on levels of platelet-derived cytokines, chemokines and interleukins in acute leukaemia patients with severe chemotherapy-induced cytopenia. (ekstern lenke)
• Sztromwasser, Pawel Szymon; Puntervoll, Pål; Petersen, Kjell (2011). Data partitioning enables the use of standard SOAP Web Services in genome-scale workflows. (ekstern lenke)
• Sissener, Nini; Hemre, Gro Ingunn; Lall, Santosh P. et al. (2011). Are apparent negative effects of feeding GM MON810 maize to Atlantic salmon, Salmo salar, caused by confounding factors?. (ekstern lenke)
• Rajcevic, Uros; Petersen, Kjell; Knol, Jaco C et al. (2009). iTRAQ-based proteomics profiling reveals increased metabolic activity and cellular cross-talk in angiogenic compared with invasive glioblastoma phenotype. (ekstern lenke)
• Johannessen, Tor-Christian Aase; Wang, Jian; Skaftnesmo, Kai Ove et al. (2009). Highly infiltrative brain tumours show reduced chemosensitivity associated with a stem cell-like phenotype. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Trösse, Christiane; Waagbø, Rune; Breck, Olav et al. (2009). Genome-wide transcription analysis of histidine-related cataract in Atlantic salmon (Salmo salar L). (ekstern lenke)
• Johannessen, Tor-Christian Aase; Wang, Jian; Skaftnesmo, Kai Ove et al. (2009). Highly infiltrative brain tumours show reduced chemosensitivity associated with a stem cell-like phenotype. (ekstern lenke)
• Olsvik, Pål Asgeir; Lie, Kai Kristoffer; Mykkeltvedt, Eva et al. (2008). Pharmacokinetics and transcriptional effects of the anti-salmon lice drug emamectin benzoate in Atlantic salmon (Salmo salar L.). (ekstern lenke)
• Stansberg, Christine; Vik-Mo, Audun Osland; Holdhus, Rita et al. (2007). Gene expression profiles in rat brain disclose CNS signature genes and regional patterns of functional specialisation. (ekstern lenke)
• Stuhr, Linda Elin Birkhaug; Raa, Anette Bjaaland; Øyan, Anne Margrete et al. (2007). Hyperoxia retards growth and induces apoptosis, changes in vascular density and gene expression in transplanted gliomas in nude rats. (ekstern lenke)
• Hjelmervik, Trond Ove R.; Lindqvist, Anna-Karin B.; Petersen, Kjell et al. (2007). The influence of the NOD Nss1/Idd5 loci on sialadenitis and gene expression in salivary glands of congenic mice. (ekstern lenke)
• Petersen, Kjell; Øyan, Anne Margrete; Rostad, Kari et al. (2007). Comparison of nucleic acid targets prepared from total RNA or poly(A) RNA for DNA oligonucleotide microarray hybridization. (ekstern lenke)
• Sakariassen, Per Øystein; Prestegarden, Lars; Wang, Jian et al. (2006). Angiogenesis-independent tumor growth mediated by stem-like cancer cells. (ekstern lenke)
• Hjelmervik, Trond Ove; Petersen, Kjell; Jonassen, Inge et al. (2005). Gene expression profiling of minor salivary glands clearly distinguishes primary Sjögren's syndrome patients from healthy control subjects. (ekstern lenke)

Fagartikkel

• Rao, Shreesha Sadashiva; Lunde, Harald Sæbø; Dolan, David William Peter et al. (2024). Corrigendum: Transcriptome-wide analyses of early immune responses in lumpfish leukocytes upon stimulation with poly(I:C). (ekstern lenke)

Poster

• Bösl, Korbinian; Bianchini, Federico; Fatima, Nazeefa et al. (2023). End-to-end data management tool assembly for Norwegian life scientist. (ekstern lenke)
• Bösl, Korbinian; Ghavidel, Fatemeh; Tekle, Kidane M et al. (2020). End-to-End Data Management Toolkit for Norwegian Life Scientists. (ekstern lenke)
• Kusonmano, Kanthida; Wik, Elisabeth; Salvesen, Helga Birgitte et al. (2012). Identification of metastasis subnetworks in endometrial cancer. (ekstern lenke)
• Kusonmano, Kanthida; Wik, Elisabeth; Salvesen, Helga Birgitte et al. (2012). An ensemble-based feature selection algorithm for identifying candidate metastasis marker genes in endometrial cancer. (ekstern lenke)
• Drabløs, Finn; Petersen, Kjell; Johansen, Jostein et al. (2010). The FUGE Bioinformatics platform: a central platform in the FUGE2 period. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Johannessen, Tor-Christian Aase; Wang, Jian; Skaftnesmo, Kai Ove et al. (2009). Highly infiltrative brain tumors show reduced chemosensitivity associated with a stem cell-like phenotype. (ekstern lenke)
• Hjelmervik, Trond Ove; Lindqvist, Anna-Karin B.; Petersen, Kjell et al. (2005). The influence of Nss1/Idd5 loci on sialadenitis and salivary gland gene expression in congenic mice models. Arthritis Rheum 2005; 52; (9) S374. Abstract no. 957. (ekstern lenke)

Faglig foredrag

• Rao, Shreesha Sadashiva; Lunde, Harald Sæbø; Fond, Amanda Kästel Sandal et al. (2022). Transcriptome-wide mapping of immune responses in lumpfish leukocytes upon in vitro Poly I:C exposure. (ekstern lenke)
• Rye, Morten Beck; Nygård, Ståle; Drabløs, Finn et al. (2019). ELIXIR.NO - The national infrastructure of bioinformatics. (ekstern lenke)
• Ghavidel, Fatemeh Zamanzad; Petersen, Kjell; Kleppe, Rune et al. (2018). Implementing Data Management in Digital Life Norway. (ekstern lenke)
• Drabløs, Finn; Nygård, Ståle; Petersen, Kjell et al. (2017). ELIXIR.NO - The national infrastructure for bioinformatics. (ekstern lenke)
• Ghavidel, Fatemeh Zamanzad; Petersen, Kjell; Kleppe, Rune et al. (2017). Data Management in Digital Life Norway - Integration of NeLS and SEEK. (ekstern lenke)
• Drabløs, Finn; Nygård, Ståle; Hovig, Johannes Eivind et al. (2014). ELIXIR - An infrastructure for bioinformatics. (ekstern lenke)
• Lærdahl, Jon Kristen; Nygård, Ståle; Jonassen, Inge et al. (2013). The national technology platform for bioinformatics. (ekstern lenke)

Vitenskapelig Kapittel/Artikkel/Konferanseartikkel

• Subramanian, Sattanathan; Sztromwasser, Pawel Szymon; Petersen, Kjell et al. (2012). Direct data transfer between SOAP web services in orchestration. (ekstern lenke)

Vitenskapelig foredrag

• Trösse, Christiane; Waagbø, Rune; Breck, Olav et al. (2009). Genome-wide transcription analysis of histidine-related cataract in Atlantic salmon (Salmo salar L). (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Ke, Xisong; Qu, Yi; Rostad, Kari et al. (2009). Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. (ekstern lenke)
• Petersen, Kjell; Eidhammer, Ingvar; Aasland, Rein et al. (1997). Structure Prediction of the Zinc-finger Protein Family by the use of a Parallel Genetic Algorithm. (ekstern lenke)

Doktorgradsavhandling

• Petersen, Kjell (2002). Zinc finger protein structure modelling using GADGET Genetic Algoriithm and Distance Geometry for Exploring Topology. (ekstern lenke)

Mastergradsoppgave

• Petersen, Kjell (1997). Structure prediction of the zinc-finger protein family by the use of a parallel genetic algorithm. (ekstern lenke)

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