Research groups
Research
I perform research on the modelling, analysis, simulation and optimization of high dimensional dynamical systems in different areas of life sciences, including molecular conformation dynamics, systems biology, and pharmacology, with a focus on rare event sampling, meshfree methods, clustering algorithms, parameter identification, and uncertainty quantification. I am particularly interested in dynamical systems that oscillate, for example hormonal rhythms.
Teaching
Publications
2018
- Robert Schwieger; Heike Siebert; Susanna Röblitz (2018). Correspondence of Trap Spaces in Different Models of Bioregulatory Networks. (external link)
- Annemarie Lang; Andrea Volkamer; Laura Behm et al. (2018). In silico Methods - Computational Alternatives to Animal Testing. (external link)
- Bernhard Reuter; Marcus Weber; Konstantin Fackeldey et al. (2018). Generalized Markov State Modeling Method for Nonequilibrium Biomolecular Dynamics: Exemplified on Amyloid β Conformational Dynamics Driven by an Oscillating Electric Field. (external link)
2020
- Marie-Christin Weber; Lisa Fischer; Alexandra Damerau et al. (2020). Macroscale mesenchymal condensation to study cytokine-driven cellular and matrix-related changes during cartilage degradation. (external link)
- Mohamed Omari; Alexander Lange; Julia Plöntzke et al. (2020). Model-based exploration of the impact of glucose metabolism on the estrous cycle dynamics in dairy cows. (external link)
- Anna-Simone Frank; Kamila Larripa; Hwayeon Ryu et al. (2020). Bifurcation and sensitivity analysis reveal key drivers of multistability in a model of macrophage polarization. (external link)
- Ilja Klebanov; Alexander Sikorski; Christof Schütte et al. (2020). Objective Priors in the Empirical Bayes Framework. (external link)
2024
- Alexander Opdahl; Espen Hartveit; Margaret Lin Veruki et al. (2024). Compartmental modeling of AII amacrine cells. (external link)
- Anna Kristina Fredheim Oma; Silje Skrede; Susanna Röblitz et al. (2024). Pharmacokinetic models in personalized dosing of vancomycin. (external link)
- Susanna Röblitz (2024). Markov State Modelling for Gene Regulatory Networks: Challenges and Opportunities. (external link)
- Susanna Röblitz (2024). Mathematical Modelling of Hormonal Regulation. (external link)
- Susanna Röblitz (2024). Metastability in Biological Systems. (external link)
- Maryam Yousefian; Elisa Tonello; Anna-Simone Josefine Frank et al. (2024). Uncovering dynamic structures within cyclic attractors of asynchronous Boolean networks with spectral clustering. (external link)
- Marie Aline Montjourides; Susanna Röblitz; Håkon Dahle (2024). Optimizing alkalinity control in recirculating aquaculture systems (RAS): A dynamic modelling approach. (external link)
- Anna-Simone Josefine Frank; Alexander Sikorski; Susanna Röblitz (2024). Spectral clustering of Markov chain transition matrices with complex eigenvalues. (external link)
2022
- Tillmann H. C. Krüger; Brigitte Leeners; Enrico Tronci et al. (2022). The androgen system across the menstrual cycle: Hormonal, (epi-)genetic and psychometric alterations. (external link)
- Anna-Simone Josefine Frank; Alexander Sikorski; Susanna Röblitz (2022). Spectral clustering of Markov chain transition matrices with complex eigenvalues. (external link)
- Marie Lefebvre; Michael P. Hengartner; Enrico Tronci et al. (2022). Food preferences throughout the menstrual cycle – A computer-assisted neuro-endocrino-psychological investigation. (external link)
- Sophie Fischer-Holzhausen; Susanna Röblitz (2022). Hormonal regulation of ovarian follicle growth in humans: Model-based exploration of cycle variability and parameter sensitivities. (external link)
- Sophie Fischer-Holzhausen; Susanna Röblitz (2022). Mathematical modelling of follicular growth and ovarian stimulation. (external link)
- Anna-Simone Josefine Frank; Kamila Larripa; Hwayeon Ryu et al. (2022). Macrophage phenotype transitions in a stochastic gene-regulatory network model. (external link)
- Trond Trætteberg Serkland; Erik Ingmar Hallin; Kjell-Morten Myhr et al. (2022). Rituximab in the treatment of multiple sclerosis: A pharmacokinetic-pharmacodynamic model. (external link)
- Julia Plöntzke; Mascha Berg; Rainald Ehrig et al. (2022). Model-based exploration of hypokalemia in dairy cows. (external link)
2021
- Brigitte Leeners; Tillmann Krüger; Kirsten Geraedts et al. (2021). Cognitive function in association with high estradiol levels resulting from fertility treatment. (external link)
- Sophie Fischer; Rainald Ehrig; Stefan Schäfer et al. (2021). Mathematical Modeling and Simulation Provides Evidence for New Strategies of Ovarian Stimulation. (external link)
- Mascha Berg; Julia Plöntzke; Heike Siebert et al. (2021). Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations. (external link)
2025
- Anna-Simone Josefine Frank; Andrea Pinke; Elizabeth Read et al. (2025). Exploring multistability in marine ecosystems: Insights from food web model dynamics. (external link)
- Maryam Yousefian; Anna-Simone Josefine Frank; Marcus Weber et al. (2025). Efficient construction of Markov state models for stochastic gene regulatory networks by domain decomposition. (external link)
- Maryam Yousefian; Luca Donati; Alexander Sikorski et al. (2025). Exploring Metastable Dynamics of Gene Regulatory Networks with ISOKANN. (external link)
- Hwayeon Ryu; Susanna Röblitz; Kamila Larripa et al. (2025). Modeling bistable dynamics arising from macrophage–tumor interactions in the tumor microenvironment. (external link)
- Trond Trætteberg Serkland; Silje Skrede; Erik Ingmar Hallin et al. (2025). Pharmacokinetic-pharmacodynamic modelling in a clinical pilot study of rituximab in multiple sclerosis: Towards personalized dosing interval. (external link)
2023
- Maryam Yousefian; Anna-Simone Josefine Frank; Marcus Weber et al. (2023). Efficient construction of Markov state models for stochastic gene regulatory networks by domain decomposition. (external link)
- Viola Schön; Michael P. Hengartner; Enrico Tronci et al. (2023). Sexual attraction to visual sexual stimuli in association with steroid hormones across menstrual cycles and fertility treatment. (external link)
- Anna-Simone Josefine Frank; Kamila Larripa; Hwayeon Ryu et al. (2023). Macrophage phenotype transitions in a stochastic gene-regulatory network model. (external link)
2019
- Alexander Lange; Robert Schwieger; Julia Plöntzke et al. (2019). Follicular competition in cows: the selection of dominant follicles as a synergistic effect. (external link)
- Brigitte Leeners; Tillman H.C. Krüger; Kirsten Geraedts et al. (2019). Associations Between Natural Physiological and Supraphysiological Estradiol Levels and Stress Perception. (external link)
- Franziska Erlekam; Sinaida Igde; Susanna Röblitz et al. (2019). Modeling of multivalent ligand-receptor binding measured by kinITC. (external link)
- A. Lang; L. Fischer; M.-C. Weber et al. (2019). Combining in vito simulation and in silico modelling towards a sophisticated human osteoarthritis model. (external link)
See a complete overview of publications in Cristin.
orcid: https://orcid.org/0000-0002-2735-0030
Publications since 2018 are also listed in CRIStin.