BINF301 - Genome scale algorithms V'21 (Course responsible) 

2019

• Aina-Cathrine Øvergård; Frank Nilsen; Noelia Nuñez-Ortiz et al. (2019). THE SALMON LOUSE (LEPEOPHTHEIRUS SALMONIS) SALIVARY GLAND SECRETES IMMUNE REGULATORY PROTEINS. (external link)
• Aina-Cathrine Øvergård; Lars Are Hamre; Sindre Grotmol et al. (2019). Lusespytt modulerer laksens immunrespons. (external link)
• Hulda Hardardottir; Rune Male; Frank Nilsen et al. (2019). Chitin synthesis and degradation in Lepeophtheirus salmonis: Molecular characterization and gene expression profile during synthesis of a new exoskeleton. (external link)
• Erna Irene Heggland; Christiane Eichner; Svein Isungset Støve et al. (2019). A scavenger receptor B (CD36)-like protein is a potential mediator of intestinal heme absorption in the hematophagous ectoparasite Lepeophtheirus salmonis. (external link)

2016

• Christiane Eichner; Michael Dondrup; Frank Nilsen (2016). RNA-sequencing reveals distinct gene expression patterns during the development of parasitic larval stages of the salmon louse (Lepeophtheirus salmonis). (external link)
• Michael Dondrup; Wei Zhang; Zhaoran Zhou et al. (2016). Licebase-a species focused resource for sea lice including an RNAi LIMS andtools for data analysis and genome annotation. (external link)
• Christiane Eichner; Michael Dondrup; Heidi Kongshaug et al. (2016). RNA-sequencing reveals distinct gene expression patterns during the development of parasitic larval stages of the salmon louse (Lepeophtheirus salmonis). (external link)

2012

• B Joseph; S Schork; Michael Dondrup et al. (2012). Repertoire and ex vivo expression of small non-coding RNAs in Neisseria meningitidis. (external link)
• Andrea Christoforou; Michael Dondrup; Morten Mattingsdal et al. (2012). Linkage-disequilibrium-based binning affects the interpretation of GWASs. (external link)
• Jessica Louise Ray; Michael Dondrup; Sejal Modha et al. (2012). Finding a needle in the virus metagenome haystack - micro-metagenome analysis captures a snapshot of the diversity of a bacteriophage armoire. (external link)

2015

• Christiane Trösse; Heidi Kongshaug; Michael Dondrup et al. (2015). Characterisation of iron regulatory protein 1A and 1B in the blood-feeding copepod Lepeophtheirus salmonis. (external link)

2024

• Terje Klemetsen; Lars Grønvold; Michael Dondrup et al. (2024). D6.5 (M24) - Report on marine biodiversity resources (an ELIXIR Norway ELIXIR3 deliverable). (external link)
• Terje Klemetsen; Bram Danneels; Sebastian Petters et al. (2024). D6.3 (M24) - Reports on the implementation of resources (an ELIXIR Norway ELIXIR3 deliverable). (external link)
• Malene Skuseth Slinning; Thaddaeus Mutugi Nthiga; Christiane Eichner et al. (2024). Major vault protein is partof an extracellular cement materialin the Atlantic salmon louse(Lepeophtheirus salmonis). (external link)
• Helena Marie Doherty Midtbø; Christiane Eichner; Lars Are Hamre et al. (2024). Salmon louse labial gland enzymes: implications for host settlement and immune modulation. (external link)

2020

• Laura Braden; Dylan Michaud; Okechukwu O. Igboeli et al. (2020). Identification of critical enzymes in the salmon louse chitin synthesis pathway as revealed by RNA interference-mediated abrogation of infectivity. (external link)

2025

• Terje Klemetsen; Michael Dondrup (2025). D6.3 (M48) - Reports on the implementation of resources (an ELIXIR Norway ELIXIR3 deliverable). (external link)

2017

• Erna Irene Heggland; Christiane Eichner; Michael Dondrup et al. (2017). Heme absorption in the salmon louse. (external link)
• Erna Irene Heggland; Frank Nilsen; Christiane Eichner et al. (2017). Functional study of a putative heme receptor in the salmon louse (Lepeophtheirus salmonis) intestine. (external link)
• Christiane Eichner; Michael Dondrup; Frank Nilsen (2017). RNA-sequencing reveals distinct gene expression patterns during the development of parasitic larval stages of the salmon louse (Lepeophtheirus salmonis). (external link)
• Aina-Cathrine Øvergård; Lars Are Hamre; Ewa Harasimczuk et al. (2017). Exocrine glands of Lepeophtheirus salmonis and secretion of possible immune regulatory proteins.. (external link)
• Christiane Eichner; Fabian Grammes; Michael Dondrup et al. (2017). The salmon louse (Lepeophtheirus salmonis) transcriptome is affected by the host resistance. (external link)

2021

• Zhaoran Zhou; Christiane Eichner; Frank Nilsen et al. (2021). A novel approach to co-expression network analysis identifies modules and genes relevant for moulting and development in the Atlantic salmon louse (Lepeophtheirus salmonis). (external link)
• Sussie Dalvin; Christiane Eichner; Michael Dondrup et al. (2021). Roles of three putative salmon louse (Lepeophtheirus salmonis) prostaglandin E2synthases in physiology and host–parasite interactions. (external link)
• Rasmus Skern-Mauritzen; Ketil Malde; Christiane Eichner et al. (2021). The salmon louse genome: Copepod features and parasitic adaptations. (external link)

2022

• Michael Dondrup; Christiane Eichner; Sussie Dalvin et al. (2022). LiceBase- An organism-Specific Database for Functional Genomics of Salmon Louse. (external link)
• Aina-Cathrine Øvergård; Helena Marie Doherty Midtbø; Lars Are Hamre et al. (2022). Small, charged proteins in salmon louse (Lepeophtheirus salmonis) secretions modulate Atlantic salmon (Salmo salar) immune responses and coagulation. (external link)

2018

• Michael Dondrup; Wei Zhang; Frank Nilsen et al. (2018). LiceBase – genom-data som kan bidra til kontroll av lakselus. (external link)
• Celia Agusti-Ridaura; Michael Dondrup; Tor Einar Horsberg et al. (2018). Caligus rogercresseyi acetylcholinesterase types and variants: a potential marker for organophosphate resistance. (external link)

See a complete overview of publications in NVA.

LiceBase - A functional genomics resouce for sea lice and related organisms

LiceVault - Unraveling the function of vaults in the Atlantic salmon louse Lepeophtheirus salmonis